CRISPRclean Pan Bacterial rRNA Depletion kits

Most RNA workflows are cumbersome and expensive because each sample needs to be prepared individually and leave insufficient sample to sequence - not so with CRISPRclean from JUMPCODE.

CRISPRclean Pan Bacterial rRNA Depletion Kit

Designed for Illumina NGS libraries, the CRISPRclean Pan Bacterial rRNA Depletion kits remove overabundant bacterial ribosomal RNA from sequencing workflows to improve sensitivity and performance.


  • Designed to target over 200 bacterial species covering all phyla in a single depletion workflow
  • Access low total RNA inputs below 1 ng previously not possible with pre-library depletion methods. Tested down to 100 pg of Total RNA (10 cells)
  • Save time and streamline your workflow by pooling multiple samples in a single depletion reaction while maintaining performance.
Species Over 200 bacteria covering all phyla
Designed to deplete 5S, 16S, and 23S rRNA
Recommended library prep NEB Next Ultra II Directional RNA Library Prep for Illumina
Laura Steinke img

"Using JUMPCODE’s accurate, efficient depletion techniques together with high-throughput sequencing has been a real turning point for my research. We can now generate data from enough low amount of samples to have real statistical significance.”

Laurey Steinke, PhD

 Associate Professor, Nebraska Medical Center
CRISPRclean workflow NGS

Product ordering

Each CRISPRclean Pan Bacterial rRNA Depletion Kit contains enough material for up to 3 reactions, and each reaction can contain up to 16 multiplexed samples.

List Price
List Price $2,880
Reactions 3
Multiplex Up to 16 samples can be pooled in a single depletion reaction
Recommended Samples per Reaction
16 Samples $60 per Sample
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